.. Licensed to the Apache Software Foundation (ASF) under one .. or more contributor license agreements. See the NOTICE file .. distributed with this work for additional information .. regarding copyright ownership. The ASF licenses this file .. to you under the Apache License, Version 2.0 (the .. "License"); you may not use this file except in compliance .. with the License. You may obtain a copy of the License at .. http://www.apache.org/licenses/LICENSE-2.0 .. Unless required by applicable law or agreed to in writing, .. software distributed under the License is distributed on an .. "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY .. KIND, either express or implied. See the License for the .. specific language governing permissions and limitations .. under the License. .. currentmodule:: pyarrow .. _python-development: ****************** Python Development ****************** This page provides general Python development guidelines and source build instructions for all platforms. Coding Style ============ We follow a similar PEP8-like coding style to the `pandas project `_. The code must pass ``flake8`` (available from pip or conda) or it will fail the build. Check for style errors before submitting your pull request with: .. code-block:: shell flake8 . flake8 --config=.flake8.cython . Unit Testing ============ We are using `pytest `_ to develop our unit test suite. After building the project (see below) you can run its unit tests like so: .. code-block:: shell pytest pyarrow Package requirements to run the unit tests are found in ``requirements-test.txt`` and can be installed if needed with ``pip -r requirements-test.txt``. The project has a number of custom command line options for its test suite. Some tests are disabled by default, for example. To see all the options, run .. code-block:: shell pytest pyarrow --help and look for the "custom options" section. Test Groups ----------- We have many tests that are grouped together using pytest marks. Some of these are disabled by default. To enable a test group, pass ``--$GROUP_NAME``, e.g. ``--parquet``. To disable a test group, prepend ``disable``, so ``--disable-parquet`` for example. To run **only** the unit tests for a particular group, prepend ``only-`` instead, for example ``--only-parquet``. The test groups currently include: * ``gandiva``: tests for Gandiva expression compiler (uses LLVM) * ``hdfs``: tests that use libhdfs or libhdfs3 to access the Hadoop filesystem * ``hypothesis``: tests that use the ``hypothesis`` module for generating random test cases. Note that ``--hypothesis`` doesn't work due to a quirk with pytest, so you have to pass ``--enable-hypothesis`` * ``large_memory``: Test requiring a large amount of system RAM * ``orc``: Apache ORC tests * ``parquet``: Apache Parquet tests * ``plasma``: Plasma Object Store tests * ``s3``: Tests for Amazon S3 * ``tensorflow``: Tests that involve TensorFlow Benchmarking ------------ For running the benchmarks, see :ref:`python-benchmarks`. Building on Linux and MacOS ============================= System Requirements ------------------- On macOS, any modern XCode (6.4 or higher; the current version is 8.3.1) is sufficient. On Linux, for this guide, we require a minimum of gcc 4.8, or clang 3.7 or higher. You can check your version by running .. code-block:: shell $ gcc --version If the system compiler is older than gcc 4.8, it can be set to a newer version using the ``$CC`` and ``$CXX`` environment variables: .. code-block:: shell export CC=gcc-4.8 export CXX=g++-4.8 Environment Setup and Build --------------------------- First, let's clone the Arrow git repository: .. code-block:: shell mkdir repos cd repos git clone https://github.com/apache/arrow.git You should now see .. code-block:: shell $ ls -l total 8 drwxrwxr-x 12 wesm wesm 4096 Apr 15 19:19 arrow/ Using Conda ~~~~~~~~~~~ Let's create a conda environment with all the C++ build and Python dependencies from conda-forge, targeting development for Python 3.7: On Linux and OSX: .. code-block:: shell conda create -y -n pyarrow-dev -c conda-forge \ --file arrow/ci/conda_env_unix.yml \ --file arrow/ci/conda_env_cpp.yml \ --file arrow/ci/conda_env_python.yml \ compilers \ python=3.7 As of January 2019, the `compilers` package is needed on many Linux distributions to use packages from conda-forge. With this out of the way, you can now activate the conda environment conda activate pyarrow-dev For Windows, see the `Building on Windows`_ section below. We need to set some environment variables to let Arrow's build system know about our build toolchain: .. code-block:: shell export ARROW_HOME=$CONDA_PREFIX Using pip ~~~~~~~~~ .. warning:: If you installed Python using the Anaconda distribution or `Miniconda `_, you cannot currently use ``virtualenv`` to manage your development. Please follow the conda-based development instructions instead. On macOS, install all dependencies through Homebrew that are required for building Arrow C++: .. code-block:: shell brew update && brew bundle --file=arrow/python/Brewfile On Debian/Ubuntu, you need the following minimal set of dependencies. All other dependencies will be automatically built by Arrow's third-party toolchain. .. code-block:: shell $ sudo apt-get install libjemalloc-dev libboost-dev \ libboost-filesystem-dev \ libboost-system-dev \ libboost-regex-dev \ python-dev \ autoconf \ flex \ bison If you are building Arrow for Python 3, install ``python3-dev`` instead of ``python-dev``. On Arch Linux, you can get these dependencies via pacman. .. code-block:: shell $ sudo pacman -S jemalloc boost Now, let's create a Python virtualenv with all Python dependencies in the same folder as the repositories and a target installation folder: .. code-block:: shell virtualenv pyarrow source ./pyarrow/bin/activate pip install six numpy pandas cython pytest # This is the folder where we will install the Arrow libraries during # development mkdir dist If your cmake version is too old on Linux, you could get a newer one via ``pip install cmake``. We need to set some environment variables to let Arrow's build system know about our build toolchain: .. code-block:: shell export ARROW_HOME=$(pwd)/dist export LD_LIBRARY_PATH=$(pwd)/dist/lib:$LD_LIBRARY_PATH Build and test -------------- Now build and install the Arrow C++ libraries: .. code-block:: shell mkdir arrow/cpp/build pushd arrow/cpp/build cmake -DCMAKE_INSTALL_PREFIX=$ARROW_HOME \ -DCMAKE_INSTALL_LIBDIR=lib \ -DARROW_FLIGHT=ON \ -DARROW_GANDIVA=ON \ -DARROW_ORC=ON \ -DARROW_PARQUET=ON \ -DARROW_PYTHON=ON \ -DARROW_PLASMA=ON \ -DARROW_BUILD_TESTS=ON \ .. make -j4 make install popd Many of these components are optional, and can be switched off by setting them to ``OFF``: * ``ARROW_FLIGHT``: RPC framework * ``ARROW_GANDIVA``: LLVM-based expression compiler * ``ARROW_ORC``: Support for Apache ORC file format * ``ARROW_PARQUET``: Support for Apache Parquet file format * ``ARROW_PLASMA``: Shared memory object store If multiple versions of Python are installed in your environment, you may have to pass additional parameters to cmake so that it can find the right executable, headers and libraries. For example, specifying `-DPYTHON_EXECUTABLE=$VIRTUAL_ENV/bin/python` (assuming that you're in virtualenv) enables cmake to choose the python executable which you are using. .. note:: On Linux systems with support for building on multiple architectures, ``make`` may install libraries in the ``lib64`` directory by default. For this reason we recommend passing ``-DCMAKE_INSTALL_LIBDIR=lib`` because the Python build scripts assume the library directory is ``lib`` Now, build pyarrow: .. code-block:: shell pushd arrow/python export PYARROW_WITH_FLIGHT=1 export PYARROW_WITH_GANDIVA=1 export PYARROW_WITH_ORC=1 export PYARROW_WITH_PARQUET=1 python setup.py build_ext --build-type=$ARROW_BUILD_TYPE --inplace popd If you did not build one of the optional components, set the corresponding ``PYARROW_WITH_$COMPONENT`` environment variable to 0. You should be able to run the unit tests with: .. code-block:: shell $ py.test pyarrow ================================ test session starts ==================== platform linux -- Python 3.6.1, pytest-3.0.7, py-1.4.33, pluggy-0.4.0 rootdir: /home/wesm/arrow-clone/python, inifile: collected 1061 items / 1 skipped [... test output not shown here ...] ============================== warnings summary =============================== [... many warnings not shown here ...] ====== 1000 passed, 56 skipped, 6 xfailed, 19 warnings in 26.52 seconds ======= To build a self-contained wheel (including the Arrow and Parquet C++ libraries), one can set ``--bundle-arrow-cpp``: .. code-block:: shell pip install wheel # if not installed python setup.py build_ext --build-type=$ARROW_BUILD_TYPE \ --bundle-arrow-cpp bdist_wheel Building with CUDA support ~~~~~~~~~~~~~~~~~~~~~~~~~~ The :mod:`pyarrow.cuda` module offers support for using Arrow platform components with Nvidia's CUDA-enabled GPU devices. To build with this support, pass ``-DARROW_CUDA=ON`` when building the C++ libraries, and set the following environment variable when building pyarrow: .. code-block:: shell export PYARROW_WITH_CUDA=1 Building on Windows =================== First, we bootstrap a conda environment similar to above, but skipping some of the Linux/macOS-only packages: First, starting from fresh clones of Apache Arrow: .. code-block:: shell git clone https://github.com/apache/arrow.git .. code-block:: shell conda create -y -n pyarrow-dev -c conda-forge ^ --file arrow\ci\conda_env_cpp.yml ^ --file arrow\ci\conda_env_python.yml ^ python=3.7 conda activate pyarrow-dev Now, we build and install Arrow C++ libraries .. code-block:: shell mkdir cpp\build cd cpp\build set ARROW_HOME=C:\thirdparty cmake -G "Visual Studio 14 2015 Win64" ^ -DCMAKE_INSTALL_PREFIX=%ARROW_HOME% ^ -DCMAKE_BUILD_TYPE=Release ^ -DARROW_BUILD_TESTS=on ^ -DARROW_CXXFLAGS="/WX /MP" ^ -DARROW_GANDIVA=on ^ -DARROW_PARQUET=on ^ -DARROW_PYTHON=on .. cmake --build . --target INSTALL --config Release cd ..\.. After that, we must put the install directory's bin path in our ``%PATH%``: .. code-block:: shell set PATH=%ARROW_HOME%\bin;%PATH% Now, we can build pyarrow: .. code-block:: shell cd python python setup.py build_ext --inplace --with-parquet Then run the unit tests with: .. code-block:: shell py.test pyarrow -v Running C++ unit tests for Python integration --------------------------------------------- Getting ``python-test.exe`` to run is a bit tricky because your ``%PYTHONHOME%`` must be configured to point to the active conda environment: .. code-block:: shell set PYTHONHOME=%CONDA_PREFIX% Now ``python-test.exe`` or simply ``ctest`` (to run all tests) should work. Windows Caveats --------------- Some components are not supported yet on Windows: * Flight RPC * Plasma